BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D11SP1|AL429396
(948 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig598 1642 0.0
>3x_Contig598
Length = 2989
Score = 1642 bits (824), Expect = 0.0
Identities = 869/886 (98%), Gaps = 2/886 (0%)
Strand = Plus / Plus
Query: 1 gataagttctcaaaatcgtaacgagtaaagaaagtacgaccgtatttttgccagavatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1705 gataagttctcaaaatcgtaacgagtaaagaaagtacgaccgtatttttgccagaaatcc 1764
Query: 61 gtttgaatagacttaatcgaagcttctttgtttgggaatctttggttgtmaatagccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1765 gtttgaatagacttaatcgaagcttctttgtttgggaatctttggttgtaaatagccaaa 1824
Query: 121 atgtttaaccatgccatgatggcccatacaccatccttctctctaacgtggttagatccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 atgtttaaccatgccatgatggcccatacaccatccttctctctaacgtggttagatccg 1884
Query: 181 gtaccgaatgattcttcaccacagattgavagtttctttgcatcgaacaaggcacagaaa 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1885 gtaccgaatgattcttcaccacagattgaaagtttctttgcatcgaacaaggcacagaaa 1944
Query: 241 aacttccaaccggtaggaacctcataacagttcaaaccttgttccttagcgactctatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1945 aacttccaaccggtaggaacctcataacagttcaaaccttgttccttagcgactctatca 2004
Query: 301 atggcagaagacgttgggaacgaacgagcyaaaccgtaaatyccttg-tttcttgaaata 359
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 2005 atggcagaagacgttgggaacgaacgagctaaaccgtaaattccttgctttcttgaaata 2064
Query: 360 agggatagcagaagcgtactcggcaatgatggcaacagaatcacctggcgagacaaatgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2065 agggatagcagaagcgtactcggcaatgatggcaacagaatcacctggcgagacaaatgc 2124
Query: 420 tggaccagcaccatagatcatatttctatcaccgtcaccatcggaggcagccccgaattg 479
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2125 tggaccagcaccatagatcatatttctatcaccgtcaccatcggaggcagcaccgaattg 2184
Query: 480 aattccgtacttgtcgactctctccactaaagtgtgggcgtaagtcaaattagggtcagg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2185 aattccgtacttgtcgactctctccactaaagtgtgggcgtaagtcaaattagggtcagg 2244
Query: 540 gtgc-accaccgaaatctggttttggatggtagttttgcmaagatgattctggtagaccc 598
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2245 gtgcaaccaccgaaatctggttttggatggtagttttgcaaagatgattctggtagaccc 2304
Query: 599 aattccttaacgaaaagagcttcaccgtaagaccggtgacaccgttcattgcatcamaca 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2305 aattccttaacgaaaagagcttcaccgtaagaccggtgacaccgttcattgcatcaaaca 2364
Query: 659 agatcttgaacccgttctttgcttgtgtgtcaatgaacgatttgatcaatgggaaatcga 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2365 agatcttgaacccgttctttgcttgtgtgtcaatgaacgatttgatcaatgggaaatcga 2424
Query: 719 agatttccttcatcaattcaacatatgccgcggtagaatcaacgatatctaccaacaaat 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2425 agatttccttcatcaattcaacatatgccgcggtagaatcaacgatatctaccaacaaat 2484
Query: 779 caccatatttctgatcttgaccgatcttggttagatcaatggcagggaaagactcgacaa 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2485 caccatatttctgatcttgaccgatcttggttagatcaatggcagggaaagactcgacaa 2544
Query: 839 tcttataatgcgtcaattcccttgatttgtgccagatcgaattggt 884
|||||||||| || |||| ||||||||||| ||||||||||||
Sbjct: 2545 tcttataatgagtaaattaacttgatttgtgaacgatcgaattggt 2590
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6116
Number of Sequences: 1807
Number of extensions: 6116
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 948
length of database: 10,358,551
effective HSP length: 16
effective length of query: 932
effective length of database: 10,329,639
effective search space: 9627223548
effective search space used: 9627223548
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)